Publications

Susheel Bhanu Busi, Laura de Nies, Janine Habier, Linda Wampach, Joëlle V Fritz, Anna Heintz-Buschart, Patrick May, Rashi Halder, Carine de Beaufort, Paul Wilmes (2021). Persistence of birth mode-dependent effects on gut microbiome composition, immune system stimulation and antimicrobial resistance during the first year of life. ISME Communications.

Laura de Nies, Sara Lopes, Susheel Bhanu Busi, Valentina Galata, Anna Heintz-Buschart, Cedric Christian Laczny, Patrick May, Paul Wilmes (2021). PathoFact: a pipeline for the prediction of virulence factors and antimicrobial resistance genes in metagenomic data. Microbiome.

Tyler J Kohler, Hannes Peter, Stilianos Fodelianakis, Paraskevi Pramateftaki, Michail Styllas, Matteo Tolosano, Vincent De Staercke, Martina Schön, Susheel Bhanu Busi, Paul Wilmes, others (2020). Patterns and drivers of extracellular enzyme activity in New Zealand glacier-fed streams. Frontiers in microbiology.

Susheel Bhanu Busi, Paraskevi Pramateftaki, Jade Brandani, Stilianos Fodelianakis, Hannes Peter, Rashi Halder, Paul Wilmes, Tom J Battin (2020). Optimised biomolecular extraction for metagenomic analysis of microbial biofilms from high-mountain streams. PeerJ.

Jacob E Moskowitz, Anthony G Doran, Zhentian Lei, Susheel B Busi, Marcia L Hart, Craig L Franklin, Lloyd W Sumner, Thomas M Keane, James M Amos-Landgraf (2020). Integration of genomics, metagenomics, and metabolomics to identify interplay between susceptibility alleles and microbiota in adenoma initiation. BMC cancer.

Susheel Bhanu Busi, Zhentian Lei, Lloyd Sumner, James Amos-Landgraf (2020). Integrated metabolome and transcriptome analyses provide insight into colon cancer development by the gut microbiota. bioRxiv.

Stilianos Fodelianakis, Alex D Washburne, Massimo Bourquin, Paraskevi Pramateftaki, Tyler J Kohler, Michail Styllas, Matteo Tolosano, Vincent De Staercke, Martina Schön, Susheel Bhanu Busi, others (2020). Homogeneous selection promotes microdiversity in the glacier-fed stream microbiome. bioRxiv.

Kayla Christine Banks, Elizabeth Anne Giuliano, Carol R Reinero, Aaron Conrad Ericsson (2020). Evaluation of healthy canine conjunctival, periocular haired skin, and nasal microbiota compared to conjunctival culture. Frontiers in veterinary science.

Varun Paul, Yogaraj Banerjee, Prosenjit Ghosh, Susheel Bhanu Busi (2020). Depthwise microbiome and isotopic profiling of a moderately saline microbial mat in a solar saltern. Scientific reports.

Aaron C Ericsson, Susheel B Busi, James M Amos-Landgraf (2019). Characterization of the Rat Gut Microbiota via 16S rRNA Amplicon Library Sequencing. Rat Genomics.

Laura de Nies, Susheel Bhanu Busi, Janine Habier, Linda Wampach, Anna Heintz-Buschart, Carine de Beaufort, Paul Wilmes (2019). 257-LB: Long-Term Effects of Birth Mode on Gut Microbiome Colonization. American Diabetes Association.

Susheel Bhanu Busi (2018). Unraveling the role of the endogenous complex gut microbiota in the Pirc rat model of human colon cancer.

Jacob E Moskowitz, Zhentian Lei, Susheel Busi, Marcia Hart, Craig Franklin, Lloyd Sumner, James Amos-Landgraf (2018). Gut microbiota and metabolite-driven phenotype modulation in a mouse model of colorectal cancer. AACR.

Jade E Jones, Susheel Bhanu Busi, Jonathan B Mitchem, James M Amos-Landgraf, Michael R Lewis (2018). Evaluation of a tumor-targeting, near-infrared fluorescent peptide for early detection and endoscopic resection of polyps in a rat model of colorectal cancer. Molecular imaging.

Susheel Bhanu Busi, Zhentian Lei, Lloyd Sumner, James Amos-Landgraf (2018). Complex gut microbiota modulate rat colon adenoma susceptibility, metabolites, and host gene expression. AACR.

Susheel Bhanu Busi, Kara B De Leon, Judy D Wall, James M Amos-Landgraf (2018). Biofilm-producing sulfate-reducing bacteria suppress tumor burden in a rat model of colon cancer. AACR.

Dan R Montonye, Aaron C Ericsson, Susheel B Busi, Cathleen Lutz, Keegan Wardwell, Craig L Franklin (2018). Acclimation and institutionalization of the mouse microbiota following transportation. Frontiers in microbiology.

Jhy-jhu Lin, Susheel Bhanu Busi (2016). High temperature, resistant probiotics for food and feed preparations.

Daniel J Davis, Holly M Doerr, Agata K Grzelak, Susheel B Busi, Eldin Jasarevic, Aaron C Ericsson, Elizabeth C Bryda (2016). Lactobacillus plantarum attenuates anxiety-related behavior and protects against stress-induced dysbiosis in adult zebrafish. Scientific reports.

Daniel J Davis, Susheel B Busi, Marcia L Hart, Catherine H Gillespie, James M Amos-Landgraf, Craig L Franklin, Aaron C Ericsson, Elizabeth C Bryda (2016). Influences of the gut microbiota on animal models of multiple species. TRANSGENIC RESEARCH.

Sarah A Hansen, Marcia L Hart, Susheel Busi, Taybor Parker, Angela Goerndt, Kevin Jones, James M Amos-Landgraf, Elizabeth C Bryda (2016). Fischer-344 Tp53-knockout rats exhibit a high rate of bone and brain neoplasia with frequent metastasis. Disease models & mechanisms.

James Amos-Landgraf, Sarah Hansen, Marcia Hart, Susheel Busi, Kevin Jones, Elizabeth Bryda (2016). Abstract LB-032: A rat knockout of p53 that exhibits high rates of osteosarcoma and menigial sarcoma with frequent metastasis. AACR.

James Amos-Landgraf, Susheel Busi, Aaron Ericsson, Marina McCoy, Taybor Parker, Rebecca Schehr, Miriam Hankins, Craig Franklin, Elizabeth Bryda (2015). Modulating disease susceptibility in a model of human colon cancer by microbiome rederivation. AACR.

Aaron C Ericsson, Sadia Akter, Marina M Hanson, Susheel B Busi, Taybor W Parker, Rebecca J Schehr, Miriam A Hankins, Carin E Ahner, Justin W Davis, Craig L Franklin, others (2015). Differential susceptibility to colorectal cancer due to naturally occurring gut microbiota. Oncotarget.

Marina McCoy, Aaron Ericsson, Miriam Hankins, Susheel Busi, Taybor Parker, Craig Franklin, Jim Amos-Landgraf, Elizabeth Bryda (2014). The impact of gut microbiota on phenotype following rederivation. TRANSGENIC RESEARCH.

Susheel Bhanu Busi (2011). Studies on the selection of a strain of lactic acid bacteria to grow at optimal conditions for the production of probiotics.